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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
124
ATAC-seq
54
snATAC-seq
47
WGBS
4
Hi-C
Assay category
Transcription
178
DNA accessibility
47
DNA methylation
4
3D chromatin structure
Date released
101
May, 2022
71
August, 2021
33
February, 2021
11
May, 2023
7
August, 2020
3
October, 2022
3
September, 2020
Available data
101
zippedFastqFolder
64
bed narrowPeak
64
xls
43
fastq
10
bigWig
6
tsv
4
hic
3
bedpe bed3+
3
cool
Organism
229
Homo sapiens
Biosample type
147
primary cell
82
tissue
Organ
99
epithelium
99
pancreas
82
kidney
Project
147
HPAP
82
AMP
Genome assembly (visualization)
85
GRCh38
4
hg19
Lab
2436
AMP-T2D consortium
228
Kyle Gaulton, UCSD
147
Klaus Kaestner, Upenn
82
Katalin Susztak, Upenn
28
Bing Ren, UCSD
20
Karen Mohlke, UNC
10
Rohit N. Kulkarni, M.D., Ph.D.
10
Xin Sun, UCSD
7
Struan F.A. Grant, CHOP
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
30
audit script error
assay_slims!
Transcription
BIOSAMPLE
ASSAY
229 results
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table-tab-icon
Clear Filters
ATAC-seq
snATAC-seq
WGBS
Hi-C
primary cell
pancreatic alpha cell
29
31
1
Langerhans cell
48
pancreatic beta cell
16
16
1
pancreatic acinar cell
4
1
tissue
kidney
75
6
1
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