Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ATAC-seq
23
ChIP-seq
2
WGBS
1
DNase-seq
1
pCHi-C
Assay category
36
DNA accessibility
23
DNA binding
Transcription
2
DNA methylation
Target of assay
20
control
3
histone
3
histone modification
2
broad histone mark
1
narrow histone mark
Date released
35
February, 2023
11
May, 2019
10
October, 2019
2
February, 2021
2
July, 2019
1
June, 2019
1
March, 2020
Available data
36
bed narrowPeak
26
bam
2
bigWig
2
tagAlign
1
bed bed3+
1
bed bedMethyl
1
bed broadPeak
1
bigBed bedMethyl
1
bigBed broadPeak
1
bigBed narrowPeak
1
tsv
Organism
62
Homo sapiens
Biosample type
54
tissue
6
primary cell
2
cell line
Organ
215
pancreas
158
epithelium
135
liver
110
brain
107
kidney
99
heart
89
connective tissue
85
bone element
63
adipose tissue
62
blood vessel
62
vasculature
44
artery
23
limb
20
musculature of body
14
blood
14
bodily fluid
11
lung
11
nerve
11
spleen
8
embryo
8
eye
5
gonad
5
ovary
5
vein
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
62
AMP
Genome assembly (visualization)
129
GRCh38
hg19
Lab
62
AMP-T2D consortium
assay_slims!
Transcription
month_released!
April, 2019
assembly!
hg19
BIOSAMPLE
ASSAY
62 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
ChIP-seq
WGBS
DNase-seq
pCHi-C
tissue
coronary artery
35
2
aorta
2
2
1
tibial artery
5
thoracic aorta
4
ascending aorta
3
primary cell
endothelial cell of umbilical vein
5
kidney capillary endothelial cell
1
cell line
smooth muscle cell of the coronary artery
2
Download