Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
RNA microarray
3
ATAC-seq
1
MPRA
1
snATAC-seq
Assay category
Transcription
4
DNA accessibility
Date released
3
February, 2023
1
May, 2022
1
October, 2022
Available data
1969
bam
1810
bed narrowPeak
1747
bigWig
1040
bigBed narrowPeak
987
fastq
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
267
bed bed3+
101
zippedFastqFolder
64
xls
54
tsv
23
bedpe bed3+
23
hic
13
bed bedMethyl
13
bigBed bedMethyl
12
bed bed3
7
bed bedgraph
5
txt
4
tar
3
cool
2
ibed
1
bedpe
1
hdf5
1
tagAlign bed3+
1
vcf
Organism
4
Homo sapiens
Biosample type
3
in vitro differentiated cells
1
cell line
1
tissue
Organ
1
musculature of body
Project
5
AMP
Genome assembly (visualization)
4
hg19
Lab
3
Struan F.A. Grant, CHOP
2
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
assay_slims!
Transcription
month_released!
July, 2019
assay_title!
RNA microarray
BIOSAMPLE
ASSAY
5 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
MPRA
snATAC-seq
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
cell line
MIN6
1
tissue
skeletal muscle tissue
1
Download