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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
27
snATAC-seq
6
WGBS
3
ChIP-seq
3
snDrop-seq
Assay category
27
DNA accessibility
Transcription
6
DNA methylation
3
DNA binding
Target of assay
3
control
Date released
135
August, 2017
125
November, 2017
123
February, 2021
101
May, 2022
94
August, 2021
83
October, 2019
79
May, 2020
76
May, 2021
66
February, 2023
40
May, 2024
31
June, 2019
30
March, 2020
29
October, 2018
23
May, 2019
17
December, 2017
July, 2019
16
January, 2021
16
November, 2018
15
April, 2019
11
May, 2023
10
April, 2020
10
November, 2020
10
October, 2017
8
February, 2018
7
August, 2020
5
December, 2018
5
January, 2018
4
January, 2019
4
September, 2017
3
September, 2020
2
December, 2019
2
March, 2019
2
November, 2019
1
August, 2018
1
August, 2022
1
March, 2023
1
October, 2022
Available data
84
txt
33
fastq
9
tsv
3
bam
3
tagAlign
Organism
123
Homo sapiens
Biosample type
87
tissue
33
primary cell
3
cell line
Organ
84
bone element
6
epithelium
6
pancreas
3
kidney
2
artery
2
blood vessel
2
heart
2
vasculature
Project
90
AMP
33
HPAP
Genome assembly (visualization)
hg19
23
GRCh38
Lab
90
AMP-T2D consortium
33
Klaus Kaestner, Upenn
Audit category:
84
inconsistent ontology term
27
audit script error
assay_slims!
Transcription
month_released!
July, 2019
assembly!
hg19
BIOSAMPLE
ASSAY
123 results
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Clear Filters
RNA microarray
snATAC-seq
WGBS
ChIP-seq
snDrop-seq
tissue
bone element
84
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
primary cell
Langerhans cell
27
pancreatic alpha cell
6
cell line
smooth muscle cell of the coronary artery
2
iPSC derived cell line
1
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