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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
ChIP-seq
6
WGBS
2
pCHi-C
1
RNA microarray
Assay category
54
DNA binding
6
DNA methylation
Transcription
Target of assay
30
histone
30
histone modification
24
control
20
broad histone mark
10
narrow histone mark
Date released
42
August, 2017
18
October, 2018
1
August, 2018
1
August, 2021
1
March, 2020
Available data
23
fastq
21
bam
7
tagAlign
2
bed bedMethyl
2
bigBed bedMethyl
2
bigWig
1
bedpe bed3+
1
tsv
Organism
62
Homo sapiens
Biosample type
62
tissue
1
in vitro differentiated cells
Organ
215
pancreas
158
epithelium
134
liver
112
kidney
109
brain
101
heart
89
connective tissue
85
bone element
63
adipose tissue
60
blood vessel
60
vasculature
44
artery
18
limb
15
musculature of body
14
blood
14
bodily fluid
11
lung
11
nerve
11
spleen
8
embryo
8
eye
5
gonad
5
ovary
5
vein
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
63
AMP
Genome assembly (visualization)
hg19
25
GRCh38
Lab
63
AMP-T2D consortium
assay_slims!
Transcription
month_released!
July, 2019
assembly!
hg19
BIOSAMPLE
ASSAY
63 results
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ChIP-seq
WGBS
pCHi-C
RNA microarray
tissue
subcutaneous abdominal adipose tissue
35
3
subcutaneous adipose tissue
10
1
omental fat pad
8
adipose tissue
1
3
1
in vitro differentiated cells
white fat cell
1
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