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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ATAC-seq
23
ChIP-seq
1
DNase-seq
1
pCHi-C
Assay category
36
DNA accessibility
23
DNA binding
Transcription
Target of assay
20
control
3
histone
3
histone modification
2
broad histone mark
1
narrow histone mark
Date released
35
February, 2023
11
May, 2019
10
October, 2019
2
February, 2021
July, 2019
1
June, 2019
1
March, 2020
Available data
36
bed narrowPeak
24
bam
2
tagAlign
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
1
bigWig
1
tsv
Organism
60
Homo sapiens
Biosample type
52
tissue
6
primary cell
2
cell line
Organ
215
pancreas
158
epithelium
134
liver
112
kidney
109
brain
101
heart
89
connective tissue
85
bone element
63
adipose tissue
60
blood vessel
60
vasculature
44
artery
18
limb
15
musculature of body
14
blood
14
bodily fluid
11
lung
11
nerve
11
spleen
8
embryo
8
eye
5
gonad
5
ovary
5
vein
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
60
AMP
Genome assembly (visualization)
130
GRCh38
hg19
Lab
60
AMP-T2D consortium
assay_slims!
Transcription
month_released!
July, 2019
assembly!
hg19
BIOSAMPLE
ASSAY
60 results
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ATAC-seq
ChIP-seq
DNase-seq
pCHi-C
tissue
coronary artery
35
2
tibial artery
5
thoracic aorta
4
aorta
2
1
ascending aorta
3
primary cell
endothelial cell of umbilical vein
5
kidney capillary endothelial cell
1
cell line
smooth muscle cell of the coronary artery
2
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