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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
WGBS
39
ATAC-seq
21
snATAC-seq
1
whole genome sequencing assay
Assay category
60
DNA accessibility
Transcription
41
DNA methylation
1
DNA sequencing
Date released
101
May, 2022
1
August, 2021
Available data
1969
bam
1810
bed narrowPeak
1747
bigWig
1040
bigBed narrowPeak
987
fastq
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
267
bed bed3+
101
zippedFastqFolder
89
txt
64
xls
56
tsv
23
bedpe bed3+
23
hic
13
bed bedMethyl
13
bigBed bedMethyl
12
bed bed3
7
bed bedgraph
4
tar
3
cool
2
ibed
1
bedpe
1
hdf5
1
tagAlign bed3+
1
vcf
Organism
102
Homo sapiens
Biosample type
101
primary cell
1
cell line
Organ
80
epithelium
80
pancreas
1
liver
Project
101
HPAP
1
AMP
Lab
101
Klaus Kaestner, Upenn
1
Bing Ren, UCSD
assay_slims!
Transcription
month_released!
July, 2019
BIOSAMPLE
ASSAY
102 results
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WGBS
ATAC-seq
snATAC-seq
whole genome sequencing assay
primary cell
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
Langerhans cell
21
pancreatic acinar cell
4
cell line
HepG2
1
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