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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
WGBS
39
ATAC-seq
21
snATAC-seq
3
Hi-C
Assay category
60
DNA accessibility
Transcription
41
DNA methylation
3
3D chromatin structure
Date released
101
May, 2022
3
October, 2022
Available data
101
zippedFastqFolder
fastq
10
bigWig
6
tsv
3
bedpe bed3+
3
cool
3
hic
Organism
104
Homo sapiens
Biosample type
104
primary cell
Organ
83
epithelium
83
pancreas
Project
104
HPAP
Genome assembly (visualization)
3
hg19
Lab
1496
AMP-T2D consortium
210
Kyle Gaulton, UCSD
104
Klaus Kaestner, Upenn
82
Katalin Susztak, Upenn
40
Patrick T. Ellinor, Broad
28
Bing Ren, UCSD
20
Karen Mohlke, UNC
10
Rohit N. Kulkarni, M.D., Ph.D.
10
Xin Sun, UCSD
7
Struan F.A. Grant, CHOP
1
ITG
1
Maike Sander, UCSD
1
Mark McCarthy, Oxford
Audit category:
3
audit script error
assay_slims!
Transcription
month_released!
October, 2018
files.file_type!
fastq
BIOSAMPLE
ASSAY
104 results
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WGBS
ATAC-seq
snATAC-seq
Hi-C
primary cell
pancreatic alpha cell
25
22
1
pancreatic beta cell
16
13
1
Langerhans cell
21
pancreatic acinar cell
4
1
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