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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
63
ChIP-seq
14
ATAC-seq
Assay category
201
DNA accessibility
63
DNA binding
Transcription
Target of assay
51
histone
51
histone modification
26
narrow histone mark
25
broad histone mark
8
control
4
RNA binding protein
4
transcription factor
Date released
406
November, 2017
322
August, 2017
284
October, 2019
218
June, 2019
217
May, 2021
152
February, 2021
151
May, 2020
140
May, 2022
139
August, 2021
120
May, 2019
111
February, 2023
94
December, 2017
87
November, 2018
80
April, 2019
74
October, 2018
49
March, 2020
46
September, 2018
43
July, 2019
41
November, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
16
January, 2021
12
November, 2020
11
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
5
March, 2019
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2018
1
August, 2022
1
March, 2023
Available data
264
bam
256
bed narrowPeak
256
bigWig
224
bigBed narrowPeak
187
bed bed3+
187
bed broadPeak
187
bigBed broadPeak
46
fastq
Organism
264
Homo sapiens
Biosample type
163
tissue
101
primary cell
Organ
81
kidney
55
epithelium
50
pancreas
43
musculature of body
35
heart
32
limb
30
brain
18
connective tissue
18
ureter
7
eye
7
vasculature
5
blood vessel
2
artery
2
liver
1
adipose tissue
Project
264
AMP
Genome assembly (visualization)
256
GRCh38
233
hg19
Lab
264
AMP-T2D consortium
Audit category:
26
inconsistent ontology term
Audit category:
32
missing controlled_by
assay_slims!
Transcription
BIOSAMPLE
ASSAY
264 results
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Clear Filters
DNase-seq
ChIP-seq
ATAC-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 34 more…
primary cell
pancreatic ductal cell
13
4
pancreatic acinar cell
8
3
pancreatic endocrine cell
11
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
+ See 22 more…
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