Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
161
ChIP-seq
18
ATAC-seq
17
pCHi-C
1
DNAme array
Assay category
Transcription
161
DNA binding
18
DNA accessibility
1
DNA methylation
Target of assay
138
histone
138
histone modification
76
broad histone mark
62
narrow histone mark
15
transcription factor
8
control
5
RNA binding protein
Date released
400
November, 2017
293
August, 2017
252
October, 2019
198
June, 2019
197
May, 2021
151
May, 2020
146
February, 2021
133
August, 2021
115
May, 2019
98
February, 2023
87
November, 2018
80
April, 2019
75
December, 2017
74
October, 2018
60
May, 2022
45
March, 2020
35
December, 2018
35
July, 2019
26
November, 2019
25
January, 2019
24
February, 2018
23
October, 2017
16
January, 2021
11
May, 2023
11
September, 2018
10
April, 2020
8
January, 2018
6
November, 2020
6
September, 2017
5
March, 2019
1
August, 2018
1
August, 2022
1
December, 2019
1
March, 2023
1
October, 2022
Available data
130
bed narrowPeak
125
bigWig
100
bam
87
tagAlign
Organism
197
Homo sapiens
Biosample type
151
primary cell
45
in vitro differentiated cells
1
tissue
Organ
epithelium
20
pancreas
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
101
T1D
96
AMP
Genome assembly (visualization)
138
hg19
100
GRCh38
Lab
176
Kyle Gaulton, UCSD
21
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
assay_slims!
Transcription
organ_slims!
epithelium
BIOSAMPLE
ASSAY
197 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
pCHi-C
DNAme array
primary cell
monocyte
85
13
1
1
CD8-positive, alpha-beta T cell
33
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
+ See 10 more…
in vitro differentiated cells
embryonic stem cell
37
5
cardiomyocytes
3
tissue
thymus
1
See all biosamples
Download