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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ChIP-seq
8
DNase-seq
5
WGBS
1
FAIRE-seq
Assay category
64
DNA binding
9
DNA accessibility
5
DNA methylation
Transcription
Target of assay
61
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
3
control
Date released
406
November, 2017
322
August, 2017
284
October, 2019
218
June, 2019
217
May, 2021
152
February, 2021
151
May, 2020
140
May, 2022
139
August, 2021
120
May, 2019
111
February, 2023
94
December, 2017
80
April, 2019
78
November, 2018
74
October, 2018
48
March, 2020
46
September, 2018
43
July, 2019
41
November, 2019
28
December, 2018
24
February, 2018
22
October, 2017
18
January, 2019
16
January, 2021
12
November, 2020
11
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
5
March, 2019
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2018
1
August, 2022
1
March, 2023
Available data
78
bam
78
fastq
74
bigWig
69
bed narrowPeak
69
bigBed narrowPeak
8
bed bed3+
8
bed broadPeak
8
bigBed broadPeak
5
bed bedMethyl
5
bigBed bedMethyl
Organism
78
Homo sapiens
Biosample type
61
cell line
17
tissue
Organ
53
liver
15
blood
15
bodily fluid
spleen
7
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
78
AMP
Genome assembly (visualization)
73
GRCh38
67
hg19
Lab
78
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
assay_slims!
Transcription
organ_slims!
spleen
BIOSAMPLE
ASSAY
78 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
cell line
HepG2
45
1
GM12878
15
tissue
liver
4
2
body of pancreas
2
2
pancreas
2
1
brain
2
omental fat pad
1
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