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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
ChIP-seq
3
Hi-C
1
MPRA
Assay category
74
DNA binding
3
3D chromatin structure
Transcription
Target of assay
30
histone
30
histone modification
29
control
19
broad histone mark
15
transcription factor
11
RNA binding protein
11
narrow histone mark
Date released
406
November, 2017
322
August, 2017
284
October, 2019
218
June, 2019
217
May, 2021
152
February, 2021
151
May, 2020
140
May, 2022
139
August, 2021
120
May, 2019
111
February, 2023
94
December, 2017
87
November, 2018
80
April, 2019
74
October, 2018
49
March, 2020
46
September, 2018
43
July, 2019
41
November, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
16
January, 2021
12
November, 2020
11
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
5
March, 2019
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2018
1
August, 2022
1
March, 2023
Available data
74
bam
58
fastq
45
bed narrowPeak
45
bigBed narrowPeak
45
bigWig
3
bedpe bed3+
3
cool
3
hic
1
txt
Organism
77
Homo sapiens
Biosample type
74
tissue
3
primary cell
1
cell line
Organ
54
pancreas
23
adipose tissue
23
connective tissue
3
epithelium
Project
75
AMP
3
HPAP
Genome assembly (visualization)
48
hg19
45
GRCh38
Lab
75
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
3
audit script error
Audit category:
1
inconsistent control read length
assay_slims!
Transcription
BIOSAMPLE
ASSAY
78 results
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Clear Filters
ChIP-seq
Hi-C
MPRA
tissue
body of pancreas
33
endocrine pancreas
16
subcutaneous adipose tissue
12
omental fat pad
11
pancreas
2
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
cell line
MIN6
1
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