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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
195
ChIP-seq
16
ATAC-seq
4
DNase-seq
4
pCHi-C
1
Hi-C
Assay category
195
DNA binding
Transcription
20
DNA accessibility
1
3D chromatin structure
Target of assay
168
histone
168
histone modification
129
narrow histone mark
39
broad histone mark
27
control
Date released
220
October, 2019
195
August, 2017
163
June, 2019
115
May, 2019
95
February, 2021
82
November, 2017
81
February, 2023
80
April, 2019
74
October, 2018
73
August, 2021
50
May, 2020
48
December, 2017
39
May, 2022
31
March, 2020
30
July, 2019
26
November, 2018
23
October, 2017
21
November, 2019
11
May, 2023
10
April, 2020
8
January, 2021
7
December, 2018
7
January, 2019
6
September, 2017
5
March, 2019
4
November, 2020
2
December, 2019
2
January, 2018
1
August, 2022
1
May, 2021
Available data
178
bam
152
bigWig
151
bed narrowPeak
49
tagAlign
47
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bedpe bed3+
1
hic
1
tagAlign bed3+
Organism
220
Homo sapiens
Biosample type
220
tissue
32
primary cell
26
cell line
6
in vitro differentiated cells
Organ
85
brain
65
limb
38
nerve
26
artery
26
blood vessel
26
vasculature
7
eye
6
heart
5
liver
4
gonad
4
kidney
4
ovary
3
pancreas
2
connective tissue
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
220
AMP
Genome assembly (visualization)
155
hg19
153
GRCh38
Lab
220
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_slims!
Transcription
BIOSAMPLE
ASSAY
220 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
pCHi-C
Hi-C
tissue
islet of Langerhans
21
13
4
tibial nerve
35
1
2
tibial artery
23
1
2
heart
5
1
brain
5
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