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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
27
snATAC-seq
6
WGBS
3
ChIP-seq
3
snDrop-seq
1
pCHi-C
Assay category
27
DNA accessibility
Transcription
6
DNA methylation
3
DNA binding
Target of assay
3
control
Date released
140
May, 2022
132
May, 2020
126
November, 2017
124
February, 2021
113
May, 2021
102
August, 2017
89
October, 2019
66
February, 2023
44
August, 2021
44
March, 2020
27
July, 2019
24
May, 2019
17
December, 2017
16
April, 2019
16
January, 2021
11
October, 2018
10
April, 2020
10
November, 2020
9
October, 2017
8
February, 2018
8
November, 2018
7
January, 2018
5
December, 2018
5
June, 2019
4
January, 2019
4
November, 2019
4
October, 2022
4
September, 2017
3
March, 2019
2
December, 2019
1
August, 2022
Available data
84
txt
33
fastq
9
tsv
3
bam
3
tagAlign
1
bed bed3+
Organism
124
Homo sapiens
Biosample type
87
tissue
33
primary cell
4
cell line
Organ
84
bone element
6
epithelium
6
pancreas
connective tissue
3
kidney
2
artery
2
blood vessel
2
heart
2
vasculature
1
liver
Project
91
AMP
33
HPAP
Genome assembly (visualization)
23
hg19
GRCh38
Lab
91
AMP-T2D consortium
33
Klaus Kaestner, Upenn
Audit category:
84
inconsistent ontology term
27
audit script error
assay_slims!
Transcription
organ_slims!
connective tissue
assembly!
GRCh38
BIOSAMPLE
ASSAY
124 results
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Clear Filters
RNA microarray
snATAC-seq
WGBS
ChIP-seq
snDrop-seq
pCHi-C
tissue
bone element
84
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
primary cell
Langerhans cell
27
pancreatic alpha cell
6
cell line
smooth muscle cell of the coronary artery
2
HepG2
1
iPSC derived cell line
1
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