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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
ATAC-seq
38
DNase-seq
4
Hi-C
1
WGBS
Assay category
90
DNA accessibility
DNA binding
Transcription
4
3D chromatin structure
1
DNA methylation
Date released
35
February, 2023
34
June, 2019
14
February, 2021
6
July, 2019
6
October, 2019
Available data
90
bed narrowPeak
56
bam
42
bigWig
38
bed bed3+
38
bed broadPeak
38
bigBed broadPeak
38
bigBed narrowPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
95
Homo sapiens
Biosample type
87
tissue
8
cell line
Organ
249
pancreas
194
epithelium
177
kidney
97
bone element
93
heart
67
vasculature
64
blood vessel
50
connective tissue
49
artery
49
limb
48
musculature of body
46
liver
44
brain
37
eye
18
ureter
17
adipose tissue
12
skeleton
11
lung
9
blood
9
bodily fluid
5
spleen
5
vein
3
nerve
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
95
AMP
Genome assembly (visualization)
91
GRCh38
55
hg19
Lab
95
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_slims!
Transcription
DNA binding
BIOSAMPLE
ASSAY
95 results
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ATAC-seq
DNase-seq
Hi-C
WGBS
tissue
coronary artery
36
2
muscle of arm
17
muscle of leg
13
1
gastrocnemius medialis
4
tibial artery
1
2
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cell line
smooth muscle cell of the coronary artery
8
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