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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
46
ATAC-seq
28
ChIP-seq
4
DNase-seq
Assay category
Transcription
50
DNA accessibility
28
DNA binding
Target of assay
20
histone
20
histone modification
14
broad histone mark
9
control
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
35
February, 2023
23
October, 2019
14
February, 2021
3
May, 2019
2
June, 2019
1
July, 2019
Available data
68
bed narrowPeak
42
bam
25
bigWig
19
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
78
Homo sapiens
Biosample type
64
tissue
14
cell line
Organ
538
liver
394
pancreas
274
epithelium
214
kidney
187
heart
170
connective tissue
145
brain
143
vasculature
138
blood vessel
100
limb
97
bone element
78
adipose tissue
77
artery
74
musculature of body
68
blood
68
bodily fluid
39
eye
30
nerve
23
spleen
18
ureter
16
vein
15
embryo
12
skeleton
11
lung
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
78
AMP
Genome assembly (visualization)
68
GRCh38
33
hg19
Lab
78
AMP-T2D consortium
assay_slims!
Transcription
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
78 results
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ATAC-seq
ChIP-seq
DNase-seq
tissue
coronary artery
36
3
2
tibial artery
1
19
2
islet of Langerhans
1
cell line
smooth muscle cell of the coronary artery
8
6
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