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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
8
snATAC-seq
2
ATAC-seq
Assay category
17
DNA binding
10
DNA accessibility
Transcription
Target of assay
17
control
Date released
12
October, 2019
8
January, 2021
3
January, 2019
3
November, 2018
1
January, 2018
Available data
98
bam
82
bigWig
81
bed narrowPeak
bigBed narrowPeak
60
fastq
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
27
Homo sapiens
Biosample type
12
tissue
8
primary cell
7
cell line
Organ
376
pancreas
247
epithelium
240
liver
175
connective tissue
135
brain
133
heart
125
kidney
97
bone element
86
vasculature
84
blood vessel
80
adipose tissue
58
artery
40
musculature of body
36
eye
31
limb
23
embryo
15
blood
15
bodily fluid
12
nerve
12
skeleton
12
spleen
11
lung
9
vein
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
19
AMP
8
T1D
Genome assembly (visualization)
2
hg19
1
GRCh38
Lab
19
AMP-T2D consortium
8
Kyle Gaulton, UCSD
assay_slims!
Transcription
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
27 results
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ChIP-seq
snATAC-seq
ATAC-seq
tissue
tibial nerve
11
1
primary cell
peripheral blood mononuclear cell
8
cell line
GM12878
6
1
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