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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
ChIP-seq
4
DNase-seq
2
Hi-C
1
ATAC-seq
1
FAIRE-seq
Assay category
52
DNA binding
6
DNA accessibility
Transcription
2
3D chromatin structure
Target of assay
39
histone
39
histone modification
25
broad histone mark
14
narrow histone mark
13
control
Date released
59
October, 2019
1
March, 2020
Available data
58
bam
42
bigWig
40
bed narrowPeak
39
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
4
bed bed3+
2
hic
1
bedpe bed3+
1
tar
Organism
60
Homo sapiens
Biosample type
38
tissue
22
primary cell
Organ
598
liver
467
pancreas
323
epithelium
262
brain
229
kidney
227
heart
203
connective tissue
169
vasculature
163
blood vessel
115
limb
97
bone element
90
adipose tissue
87
musculature of body
83
artery
69
blood
69
bodily fluid
42
eye
38
nerve
25
spleen
23
embryo
22
vein
18
ureter
12
skeleton
11
lung
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
60
AMP
Genome assembly (visualization)
44
hg19
39
GRCh38
Lab
60
AMP-T2D consortium
Audit category:
1
audit script error
assay_slims!
Transcription
BIOSAMPLE
ASSAY
60 results
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ChIP-seq
DNase-seq
Hi-C
ATAC-seq
FAIRE-seq
tissue
tibial nerve
35
2
1
primary cell
endothelial cell of umbilical vein
17
2
2
1
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