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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ChIP-seq
2
WGBS
2
pCHi-C
1
ATAC-seq
Assay category
8
DNA binding
2
DNA methylation
1
DNA accessibility
Target of assay
8
control
Date released
5
November, 2018
4
December, 2018
2
March, 2020
1
January, 2019
1
October, 2017
Available data
24
bam
24
fastq
16
bigWig
14
bed narrowPeak
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
tsv
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
13
Homo sapiens
Biosample type
13
tissue
Organ
376
pancreas
247
epithelium
240
liver
175
connective tissue
135
brain
133
heart
125
kidney
97
bone element
86
vasculature
84
blood vessel
80
adipose tissue
58
artery
40
musculature of body
36
eye
31
limb
23
embryo
15
blood
15
bodily fluid
12
nerve
12
skeleton
12
spleen
11
lung
9
vein
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
13
AMP
Genome assembly (visualization)
3
GRCh38
1
hg19
Lab
13
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_slims!
Transcription
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
13 results
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Clear Filters
ChIP-seq
WGBS
pCHi-C
ATAC-seq
tissue
spleen
8
2
1
1
gastric (mucosa of stomach)
1
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