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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
13
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
7
control
6
transcription factor
3
other context
3
other post-translational modification
Date released
9
November, 2018
7
December, 2018
January, 2019
1
March, 2020
1
October, 2017
Available data
17
bam
17
fastq
10
bigWig
8
bed narrowPeak
7
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
18
Homo sapiens
Biosample type
18
tissue
Organ
598
liver
467
pancreas
323
epithelium
262
brain
229
kidney
227
heart
connective tissue
169
vasculature
163
blood vessel
115
limb
97
bone element
90
adipose tissue
87
musculature of body
83
artery
51
blood
51
bodily fluid
42
eye
38
nerve
23
embryo
22
vein
18
spleen
18
ureter
12
skeleton
11
lung
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
18
AMP
Genome assembly (visualization)
10
GRCh38
8
hg19
Lab
18
AMP-T2D consortium
assay_slims!
Transcription
organ_slims!
connective tissue
month_released!
January, 2019
BIOSAMPLE
ASSAY
18 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
pCHi-C
tissue
spleen
13
2
1
1
1
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