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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
3
DNase-seq
2
ATAC-seq
2
WGBS
1
pCHi-C
Assay category
55
DNA binding
5
DNA accessibility
Transcription
2
DNA methylation
Target of assay
30
histone
30
histone modification
20
broad histone mark
19
control
10
narrow histone mark
6
transcription factor
3
other context
3
other post-translational modification
Date released
38
October, 2019
9
November, 2018
7
December, 2018
7
January, 2019
1
March, 2020
1
October, 2017
Available data
62
bam
43
bigWig
41
bed narrowPeak
39
bigBed narrowPeak
24
fastq
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
tsv
Organism
63
Homo sapiens
Biosample type
63
tissue
Organ
598
liver
467
pancreas
323
epithelium
262
brain
229
kidney
227
heart
203
connective tissue
169
vasculature
163
blood vessel
115
limb
97
bone element
90
adipose tissue
87
musculature of body
83
artery
69
blood
69
bodily fluid
42
eye
38
nerve
25
spleen
23
embryo
22
vein
18
ureter
12
skeleton
11
lung
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
63
AMP
Genome assembly (visualization)
43
GRCh38
41
hg19
Lab
63
AMP-T2D consortium
assay_slims!
Transcription
BIOSAMPLE
ASSAY
63 results
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ChIP-seq
DNase-seq
ATAC-seq
WGBS
pCHi-C
tissue
tibial nerve
35
2
1
spleen
20
1
1
2
1
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