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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
13
ATAC-seq
2
WGBS
1
DNase-seq
1
pCHi-C
Assay category
20
DNA binding
14
DNA accessibility
Transcription
2
DNA methylation
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
9
November, 2018
8
February, 2021
7
December, 2018
7
January, 2019
4
February, 2023
1
March, 2020
1
October, 2017
Available data
32
bam
24
fastq
22
bed narrowPeak
16
bigWig
13
bigBed narrowPeak
4
bed bed3
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
37
Homo sapiens
Biosample type
37
tissue
Organ
598
liver
467
pancreas
323
epithelium
262
brain
229
kidney
227
heart
203
connective tissue
169
vasculature
163
blood vessel
115
limb
97
bone element
90
adipose tissue
87
musculature of body
83
artery
69
blood
69
bodily fluid
42
eye
38
nerve
25
spleen
23
embryo
22
vein
18
ureter
12
skeleton
11
lung
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
37
AMP
Genome assembly (visualization)
26
hg19
24
GRCh38
Lab
37
AMP-T2D consortium
assay_slims!
Transcription
BIOSAMPLE
ASSAY
37 results
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ChIP-seq
ATAC-seq
WGBS
DNase-seq
pCHi-C
tissue
spleen
20
1
2
1
1
acetabular part of hip bone
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
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