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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
18
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
narrow histone mark
Date released
9
November, 2018
7
December, 2018
5
January, 2019
1
March, 2020
1
October, 2017
Available data
22
bam
22
fastq
14
bigWig
12
bed narrowPeak
11
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
23
Homo sapiens
Biosample type
23
tissue
Organ
538
liver
394
pancreas
274
epithelium
214
kidney
187
heart
170
connective tissue
145
brain
143
vasculature
138
blood vessel
100
limb
97
bone element
78
adipose tissue
77
artery
74
musculature of body
68
blood
68
bodily fluid
39
eye
30
nerve
23
spleen
18
ureter
16
vein
15
embryo
12
skeleton
11
lung
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
23
AMP
Genome assembly (visualization)
14
GRCh38
12
hg19
Lab
23
AMP-T2D consortium
assay_slims!
Transcription
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
23 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
pCHi-C
tissue
spleen
18
2
1
1
1
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