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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
4
ChIP-seq
4
DNase-seq
4
pCHi-C
1
RRBS
Assay category
32
DNA accessibility
Transcription
4
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
RNA binding protein
1
control
1
transcription factor
Date released
27
February, 2023
7
October, 2019
6
June, 2019
1
July, 2019
Available data
32
bed narrowPeak
6
bam
5
bigBed narrowPeak
5
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
41
Homo sapiens
Biosample type
37
tissue
4
primary cell
Organ
540
liver
458
pancreas
315
epithelium
259
brain
226
kidney
193
connective tissue
181
heart
164
vasculature
159
blood vessel
115
limb
97
bone element
87
musculature of body
85
adipose tissue
82
artery
59
blood
59
bodily fluid
41
eye
38
nerve
25
spleen
23
embryo
22
vein
18
ureter
12
skeleton
11
lung
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
41
AMP
Genome assembly (visualization)
33
hg19
5
GRCh38
Lab
41
AMP-T2D consortium
assay_slims!
Transcription
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
41 results
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Clear Filters
ATAC-seq
ChIP-seq
DNase-seq
pCHi-C
RRBS
tissue
retina
15
3
pigmented layer of retina
12
islet of Langerhans
1
2
4
primary cell
retinal pigment epithelial cell
2
1
1
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