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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ChIP-seq
9
DNase-seq
7
WGBS
1
FAIRE-seq
Assay category
64
DNA binding
10
DNA accessibility
7
DNA methylation
Transcription
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
control
3
other context
3
other post-translational modification
Date released
335
November, 2017
272
August, 2017
245
October, 2019
210
June, 2019
208
May, 2021
149
February, 2021
140
May, 2022
128
May, 2020
127
August, 2021
111
February, 2023
97
May, 2019
81
November, 2018
73
December, 2017
66
April, 2019
49
March, 2020
46
September, 2018
45
October, 2018
43
July, 2019
39
November, 2019
31
December, 2018
21
January, 2019
20
October, 2017
16
February, 2018
16
January, 2021
11
May, 2023
10
April, 2020
8
January, 2018
7
August, 2020
7
November, 2020
5
March, 2019
5
September, 2017
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2018
1
August, 2022
1
March, 2023
Available data
81
bam
81
fastq
80
bigWig
73
bed narrowPeak
73
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
Organism
81
Homo sapiens
Biosample type
58
cell line
23
tissue
Organ
53
liver
12
blood
12
bodily fluid
7
pancreas
6
spleen
2
brain
1
adipose tissue
1
connective tissue
Project
81
AMP
Genome assembly (visualization)
79
GRCh38
71
hg19
Lab
81
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
assay_slims!
Transcription
target.investigated_as!
control
BIOSAMPLE
ASSAY
81 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
cell line
HepG2
45
1
GM12878
12
tissue
liver
4
2
spleen
3
1
2
body of pancreas
2
2
pancreas
2
1
brain
2
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