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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
WGBS
39
ATAC-seq
21
snATAC-seq
Assay category
60
DNA accessibility
Transcription
41
DNA methylation
Date released
101
May, 2022
Available data
1000
bam
910
bigWig
831
bed narrowPeak
711
fastq
479
bigBed narrowPeak
160
tagAlign
108
bed broadPeak
108
bigBed broadPeak
101
zippedFastqFolder
66
bed bed3+
30
tsv
13
bedpe bed3+
12
hic
11
bed bedMethyl
11
bigBed bedMethyl
7
bed bed3
7
bed bedgraph
5
hdf5
4
tar
4
txt
3
cool
2
ibed
1
vcf
Organism
101
Homo sapiens
Biosample type
101
primary cell
Organ
80
epithelium
80
pancreas
Project
101
HPAP
Lab
101
Klaus Kaestner, Upenn
assay_slims!
Transcription
target.investigated_as!
other post-translational modification
biosample_type!
tissue
BIOSAMPLE
ASSAY
101 results
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WGBS
ATAC-seq
snATAC-seq
primary cell
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
Langerhans cell
21
pancreatic acinar cell
4
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