Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ATAC-seq
5
Hi-C
4
DNase-seq
Assay category
139
Transcription
59
DNA binding
46
DNA accessibility
5
3D chromatin structure
2
DNA methylation
Date released
16
May, 2021
9
February, 2023
8
November, 2019
6
October, 2019
4
June, 2019
4
March, 2020
4
May, 2020
Available data
19
bam
16
bed narrowPeak
11
bigWig
7
tsv
6
bed bed3+
5
bedpe bed3+
5
hic
4
bed broadPeak
4
bigBed broadPeak
4
bigBed narrowPeak
1
bed bedgraph
1
txt
Organism
51
Homo sapiens
Biosample type
20
cell line
15
primary cell
14
in vitro differentiated cells
2
tissue
Organ
22
epithelium
20
pancreas
4
connective tissue
1
adipose tissue
1
heart
1
kidney
1
limb
1
liver
1
musculature of body
1
vasculature
Project
51
AMP
Genome assembly (visualization)
29
hg19
15
GRCh38
Lab
50
AMP-T2D consortium
1
Struan F.A. Grant, CHOP
Audit category:
51
inconsistent ontology term
33
audit script error
1
inconsistent replicate
BIOSAMPLE
ASSAY
51 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
Hi-C
DNase-seq
cell line
EndoC_BH1
19
1
primary cell
gabaergic neuron
3
microglial cell/astrocyte
3
central memory CD8-positive, alpha-beta T cell
2
naive B cel
2
Heart fetal (cardiac muscle cell)
1
+ See 4 more…
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
cardiomyocytes (cardiac muscle cell)
1
2
cardiac precursors (cardiac muscle cell)
1
1
immature adipocyte
2
lymphocyte of B lineage (iPSC)
1
+ See 1 more…
tissue
adipose tissue(adipose white tissue)
1
muscle of leg
1
See all biosamples
Download