Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1037
total RNA-seq
174
single cell RNA-seq
16
Hi-C
16
small RNA-seq
Assay category
1227
Transcription
867
DNA binding
470
DNA accessibility
38
DNA methylation
16
3D chromatin structure
Date released
450
February, 2021
158
August, 2021
143
May, 2020
120
July, 2018
89
August, 2017
51
July, 2019
47
September, 2023
39
May, 2021
27
May, 2022
25
February, 2020
23
October, 2019
20
November, 2019
16
March, 2020
14
February, 2023
9
April, 2020
6
April, 2018
4
May, 2023
1
December, 2019
1
March, 2019
Available data
1050
tsv
923
bam
917
bigWig
103
fastq
72
txt
11
hic
10
bedpe bed3+
6
csv
1
bedpe
Organism
1243
Homo sapiens
Biosample type
1243
tissue
446
primary cell
142
in vitro differentiated cells
119
cell line
2
stem cell
Organ
457
connective tissue
399
adipose tissue
295
pancreas
175
liver
116
kidney
112
heart
62
bone element
21
brain
19
eye
14
blood vessel
14
vasculature
13
musculature of body
11
limb
9
lung
5
nerve
4
artery
4
skeleton
2
epithelium
1
spinal cord
Project
1180
AMP
47
KPMP
9
LungMap
7
T1D
Genome assembly (visualization)
929
hg19
918
GRCh38
Lab
1091
AMP-T2D consortium
61
Katalin Susztak, Upenn
47
KPMP
20
Karen Mohlke, UNC
12
Kyle Gaulton, UCSD
9
Xin Sun, UCSD
3
Bing Ren, UCSD
Audit category:
5
audit script error
1
inconsistent ontology term
BIOSAMPLE
ASSAY
1243 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
Hi-C
small RNA-seq
tissue
adipose tissue
382
islet of Langerhans
298
3
liver
167
1
1
1
kidney
49
64
1
bone tissue
58
+ See 56 more…
See all biosamples
Download