Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
Hi-C
Assay category
917
DNA binding
683
Transcription
349
DNA accessibility
59
DNA methylation
14
3D chromatin structure
1
DNA sequencing
Date released
4
July, 2019
October, 2019
3
March, 2020
3
October, 2022
1
August, 2021
1
December, 2018
1
March, 2023
1
November, 2019
Available data
9
hic
8
bedpe bed3+
4
bed bed3+
4
bigWig
4
hdf5
3
cool
1
fastq
Organism
14
Homo sapiens
Biosample type
tissue
9
primary cell
3
cell line
2
in vitro differentiated cells
Organ
7
epithelium
4
pancreas
3
blood vessel
3
brain
3
liver
3
vasculature
1
connective tissue
1
vein
Project
10
AMP
3
HPAP
1
ITG
Genome assembly (visualization)
12
hg19
1
GRCh38
Lab
9
AMP-T2D consortium
3
Klaus Kaestner, Upenn
1
Bing Ren, UCSD
1
ITG
Audit category:
3
audit script error
3
inconsistent ontology term
biosample_type!
tissue
month_released!
October, 2019
BIOSAMPLE
ASSAY
14 results
search-icon
table-tab-icon
Clear Filters
Hi-C
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
chondrocytes
1
endothelial cell of hepatic sinusoid
1
+ See 4 more…
cell line
HepG2
2
EndoC_BH1
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
See all biosamples
Download