Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
Hi-C
Assay category
1305
Transcription
1174
DNA binding
402
DNA accessibility
21
3D chromatin structure
19
DNA methylation
Date released
10
March, 2020
5
October, 2019
4
July, 2019
2
November, 2019
Available data
16
hic
15
bedpe bed3+
5
bed bed3+
5
bigWig
5
hdf5
Organism
21
Homo sapiens
Biosample type
9
tissue
6
primary cell
4
in vitro differentiated cells
2
cell line
Organ
5
blood vessel
5
epithelium
5
vasculature
4
pancreas
3
brain
3
heart
2
liver
2
musculature of body
2
vein
1
connective tissue
Project
21
AMP
Genome assembly (visualization)
21
hg19
1
GRCh38
Lab
21
AMP-T2D consortium
3
Klaus Kaestner, Upenn
2
Bing Ren, UCSD
1
Katalin Susztak, Upenn
Audit category:
5
inconsistent ontology term
1
audit script error
Audit category:
1
inconsistent assembly
BIOSAMPLE
ASSAY
21 results
search-icon
table-tab-icon
Clear Filters
Hi-C
tissue
psoas muscle
2
aorta
1
heart
1
heart left ventricle
1
heart right ventricle
1
+ See 3 more…
primary cell
endothelial cell of umbilical vein
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
cardiac precursors (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
cell line
EndoC_BH1
1
Panc1
1
See all biosamples
Download