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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
Hi-C
Assay category
1659
DNA binding
1476
Transcription
562
DNA accessibility
50
DNA methylation
10
3D chromatin structure
Date released
8
July, 2019
1
December, 2018
1
October, 2019
Available data
hic
15
bedpe bed3+
5
bed bed3+
5
bigWig
5
hdf5
1
fastq
Organism
10
Homo sapiens
Biosample type
4
primary cell
4
tissue
2
cell line
Organ
4
limb
4
musculature of body
3
brain
2
blood vessel
2
epithelium
2
liver
2
vasculature
1
connective tissue
1
pancreas
Project
10
AMP
Genome assembly (visualization)
5
hg19
1
GRCh38
Lab
10
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
1
inconsistent assembly
files.file_type!
hic
BIOSAMPLE
ASSAY
10 results
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Hi-C
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
tissue
gastrocnemius medialis
4
cell line
HepG2
1
Panc1
1
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