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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
ATAC-seq
11
snATAC-seq
7
DNase-seq
2
FAIRE-seq
Assay category
291
Transcription
117
DNA binding
82
DNA accessibility
6
DNA methylation
4
3D chromatin structure
Date released
19
November, 2019
18
May, 2022
13
February, 2023
8
January, 2021
5
October, 2017
4
June, 2019
4
March, 2019
3
November, 2018
3
October, 2019
2
August, 2017
2
March, 2020
1
August, 2022
Available data
51
bam
50
bed narrowPeak
29
fastq
16
bigWig
9
bigBed narrowPeak
8
bed broadPeak
6
bed bed3+
6
bigBed broadPeak
1
tsv
Organism
82
Homo sapiens
Biosample type
82
tissue
71
primary cell
20
cell line
Organ
150
kidney
82
pancreas
66
heart
44
limb
43
blood vessel
43
vasculature
41
artery
34
musculature of body
32
brain
31
eye
25
liver
18
ureter
12
bone element
12
epithelium
12
skeleton
10
lung
8
adipose tissue
8
connective tissue
3
nerve
2
spleen
1
pituitary gland
1
skin of body
Project
61
AMP
21
T1D
Genome assembly (visualization)
53
hg19
33
GRCh38
Lab
39
Kyle Gaulton, UCSD
38
AMP-T2D consortium
2
Mark McCarthy, Oxford
1
Bing Ren, UCSD
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
1
audit script error
BIOSAMPLE
ASSAY
82 results
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ATAC-seq
snATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
58
7
1
1
body of pancreas
4
4
pancreas
4
2
1
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