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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
197
DNase-seq
Assay category
197
DNA accessibility
79
DNA binding
Date released
187
June, 2019
November, 2018
7
October, 2019
2
August, 2017
1
November, 2020
Available data
482
bed narrowPeak
379
bam
340
bigWig
231
bigBed narrowPeak
200
bed bed3+
199
bed broadPeak
197
bigBed broadPeak
92
fastq
64
xls
60
zippedFastqFolder
14
tsv
12
bed bed3
7
bed bedgraph
4
txt
1
tar
Organism
197
Homo sapiens
Biosample type
167
tissue
28
primary cell
1
cell line
1
in vitro differentiated cells
Organ
78
kidney
36
limb
33
musculature of body
30
brain
30
heart
18
ureter
16
epithelium
11
vasculature
9
blood vessel
8
connective tissue
5
pancreas
4
artery
4
eye
2
liver
2
nerve
2
vein
1
adipose tissue
Project
197
AMP
Genome assembly (visualization)
196
GRCh38
174
hg19
Lab
197
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
assay_slims!
DNA methylation
month_released!
November, 2018
BIOSAMPLE
ASSAY
197 results
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DNase-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 36 more…
primary cell
cardiac fibroblast
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
+ See 18 more…
cell line
Panc1
1
in vitro differentiated cells
adipocyte
1
See all biosamples
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