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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
snATAC-seq
22
ATAC-seq
8
ChIP-seq
Assay category
563
Transcription
49
DNA accessibility
8
DNA binding
6
DNA methylation
Target of assay
5
transcription factor
3
control
Date released
406
November, 2017
307
August, 2017
275
October, 2019
218
June, 2019
199
May, 2021
150
May, 2020
125
August, 2021
120
May, 2019
105
February, 2023
99
May, 2022
94
December, 2017
80
April, 2019
80
November, 2018
74
October, 2018
57
February, 2021
46
September, 2018
39
November, 2019
34
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
16
January, 2021
11
May, 2023
11
September, 2017
10
April, 2020
8
July, 2019
7
August, 2020
7
March, 2020
4
March, 2019
3
January, 2018
3
September, 2020
2
November, 2020
1
August, 2022
Available data
27
fastq
26
bam
23
bed narrowPeak
8
tagAlign
6
bigWig
4
bed bedgraph
2
bed bed3
Organism
57
Homo sapiens
Biosample type
28
primary cell
17
cell line
8
tissue
4
in vitro differentiated cells
Organ
14
artery
14
blood vessel
14
heart
14
vasculature
8
bone element
8
skeleton
6
limb
5
connective tissue
1
liver
Project
30
AMP
27
HPAP
Genome assembly (visualization)
27
hg19
23
GRCh38
Lab
30
AMP-T2D consortium
27
Klaus Kaestner, Upenn
Audit category:
27
audit script error
1
inconsistent replicate
BIOSAMPLE
ASSAY
57 results
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snATAC-seq
ATAC-seq
ChIP-seq
primary cell
Langerhans cell
27
osteoblast
1
cell line
smooth muscle cell of the coronary artery
8
6
iPSC derived cell line
2
HepG2
1
tissue
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
proximal epiphysis
1
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in vitro differentiated cells
adipocyte
4
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