Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
ATAC-seq
22
DNase-seq
1
FAIRE-seq
Assay category
254
Transcription
247
DNA binding
107
DNA accessibility
10
DNA methylation
9
3D chromatin structure
Date released
45
May, 2020
17
June, 2019
14
September, 2018
13
May, 2021
5
August, 2017
5
October, 2019
5
September, 2017
2
November, 2020
1
February, 2021
Available data
107
bam
91
bigWig
62
bed narrowPeak
45
bigBed narrowPeak
23
fastq
21
bed broadPeak
21
bigBed broadPeak
20
bed bed3+
1
bed bed3
1
tar
Organism
107
Homo sapiens
Biosample type
288
tissue
107
primary cell
43
in vitro differentiated cells
15
cell line
Organ
34
epithelium
22
pancreas
7
connective tissue
6
vasculature
5
brain
4
blood vessel
4
kidney
3
liver
3
vein
2
heart
1
eye
1
musculature of body
Project
107
AMP
Genome assembly (visualization)
107
hg19
76
GRCh38
Lab
107
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
BIOSAMPLE
ASSAY
107 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
DNase-seq
FAIRE-seq
primary cell
monocyte
15
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
+ See 45 more…
See all biosamples
Download