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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ATAC-seq
5
DNase-seq
Assay category
429
DNA binding
162
Transcription
28
DNA accessibility
3
3D chromatin structure
2
DNA methylation
Date released
20
May, 2022
3
November, 2018
2
June, 2019
1
August, 2017
1
February, 2021
1
October, 2019
Available data
28
bed narrowPeak
26
bigWig
8
bam
6
bigBed narrowPeak
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
4
fastq
1
bed bed3
Organism
28
Homo sapiens
Biosample type
24
tissue
3
primary cell
1
cell line
Organ
79
pancreas
73
kidney
50
epithelium
44
limb
39
heart
35
musculature of body
33
connective tissue
31
eye
28
liver
24
brain
22
vasculature
20
blood vessel
18
ureter
14
artery
12
bone element
12
skeleton
8
adipose tissue
3
nerve
3
vein
2
spleen
1
blood
1
bodily fluid
Project
28
AMP
Genome assembly (visualization)
28
hg19
8
GRCh38
Lab
20
Karen Mohlke, UNC
8
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
1
inconsistent replicate
BIOSAMPLE
ASSAY
28 results
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ATAC-seq
DNase-seq
tissue
liver
20
2
right lobe of liver
1
1
primary cell
Liver fetal (hepatocyte)
1
hepatic stellate cell
1
hepatocyte
1
cell line
HepG2
1
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