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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ATAC-seq
6
DNase-seq
1
FAIRE-seq
Assay category
54
Transcription
23
DNA binding
15
DNA accessibility
4
3D chromatin structure
1
DNA methylation
Date released
8
February, 2021
4
June, 2019
3
October, 2019
Available data
15
bam
15
bed narrowPeak
7
bigBed narrowPeak
7
bigWig
6
bed bed3+
6
bed broadPeak
6
bigBed broadPeak
1
tar
Organism
15
Homo sapiens
Biosample type
tissue
8
cell line
7
primary cell
Organ
79
epithelium
59
pancreas
25
connective tissue
15
vasculature
13
blood vessel
13
kidney
11
heart
9
blood
9
bodily fluid
8
artery
5
brain
4
liver
3
vein
1
eye
1
musculature of body
Project
15
AMP
Genome assembly (visualization)
14
GRCh38
14
hg19
Lab
15
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
biosample_type!
tissue
files.file_type!
fastq
BIOSAMPLE
ASSAY
15 results
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Clear Filters
ATAC-seq
DNase-seq
FAIRE-seq
cell line
smooth muscle cell of the coronary artery
8
primary cell
endothelial cell of umbilical vein
2
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
kidney capillary endothelial cell
1
smooth muscle cell of the brain vasculature
1
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