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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
90
ATAC-seq
1
DNase-seq
Assay category
188
Transcription
101
DNA binding
91
DNA accessibility
47
DNA methylation
5
3D chromatin structure
Date released
39
May, 2022
16
May, 2021
14
September, 2018
7
August, 2020
5
September, 2017
3
August, 2017
3
September, 2020
2
March, 2020
1
November, 2019
1
October, 2019
Available data
39
zippedFastqFolder
35
bigWig
32
fastq
24
bam
24
bed narrowPeak
23
bigBed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
91
Homo sapiens
Biosample type
tissue
71
primary cell
20
cell line
Organ
111
epithelium
91
pancreas
26
connective tissue
15
vasculature
13
blood vessel
13
kidney
11
heart
9
blood
9
bodily fluid
8
artery
5
brain
4
liver
3
vein
1
eye
1
musculature of body
Project
49
HPAP
42
AMP
Genome assembly (visualization)
34
GRCh38
26
hg19
Lab
49
Klaus Kaestner, Upenn
42
AMP-T2D consortium
Audit category:
19
inconsistent ontology term
biosample_type!
tissue
BIOSAMPLE
ASSAY
91 results
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ATAC-seq
DNase-seq
primary cell
pancreatic alpha cell
35
pancreatic beta cell
23
pancreatic acinar cell
9
pancreatic ductal cell
4
cell line
EndoC_BH1
19
Panc1
1
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