Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
151
ATAC-seq
31
DNase-seq
1
FAIRE-seq
Assay category
195
DNA binding
183
DNA accessibility
163
Transcription
11
DNA methylation
6
3D chromatin structure
Date released
100
May, 2020
24
June, 2019
14
September, 2018
13
May, 2021
12
February, 2023
7
October, 2019
5
August, 2017
5
September, 2017
2
November, 2020
1
February, 2021
Available data
114
bam
98
bigWig
69
bed narrowPeak
52
bigBed narrowPeak
28
bed broadPeak
28
bigBed broadPeak
27
bed bed3+
23
fastq
12
tsv
1
bed bed3
1
tar
Organism
183
Homo sapiens
Biosample type
439
tissue
183
primary cell
43
in vitro differentiated cells
31
cell line
Organ
42
epithelium
22
pancreas
12
kidney
8
connective tissue
7
vasculature
5
blood vessel
5
brain
3
heart
3
liver
3
vein
1
eye
1
musculature of body
Project
183
AMP
97
HPAP
8
T1D
Genome assembly (visualization)
107
hg19
66
GRCh38
Lab
183
AMP-T2D consortium
Audit category:
15
inconsistent ontology term
BIOSAMPLE
ASSAY
183 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
DNase-seq
FAIRE-seq
primary cell
CD4-positive, alpha-beta memory T cell
22
naive thymus-derived CD4-positive, alpha-beta T cell
22
monocyte
15
macrophage
11
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
cardiac fibroblast
3
endothelial cell of umbilical vein
2
1
gabaergic neuron
3
glutamatergic neuron
3
kidney tubule cell
3
microglial cell/astrocyte
3
oligodendrocyte
3
osteoblast
2
1
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
T-helper 2 cell
2
central memory CD8-positive, alpha-beta T cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
gamma-delta T cell
2
glomerular visceral epithelial cell
2
kidney glomerular epithelial cell
2
mature natural killer cell
2
memory B cell
2
memory T cell
2
memory regulatory T cell
2
naive B cel
2
naive regulatory T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
regulatory T cell
2
skeletal muscle myoblast
2
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
hepatic stellate cell
1
hepatocyte
1
immature natural killer cell
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
myeloid dendritic cell
1
natural killer cell
1
plasma cell
1
plasmacytoid dendritic cell
1
renal cortical epithelial cell
1
retinal pigment epithelial cell
1
skeletal muscle cell
1
smooth muscle cell of the brain vasculature
1
See all biosamples
Download