Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
177
DNase-seq
158
ATAC-seq
Assay category
918
Transcription
590
DNA binding
335
DNA accessibility
16
DNA methylation
Date released
163
June, 2019
64
August, 2021
35
February, 2023
20
November, 2019
11
May, 2023
9
November, 2018
8
February, 2021
8
October, 2017
6
July, 2019
6
October, 2019
3
August, 2017
2
March, 2019
Available data
319
bed narrowPeak
222
bam
195
bigWig
179
bigBed narrowPeak
177
bed broadPeak
176
bed bed3+
176
bigBed broadPeak
64
xls
20
fastq
Organism
335
Homo sapiens
Biosample type
335
tissue
76
primary cell
18
in vitro differentiated cells
12
cell line
Organ
143
kidney
66
heart
44
limb
43
blood vessel
43
vasculature
41
artery
33
pancreas
32
musculature of body
29
brain
18
ureter
8
bone element
8
skeleton
5
adipose tissue
5
connective tissue
4
liver
3
eye
3
nerve
2
spleen
Project
335
AMP
Genome assembly (visualization)
335
GRCh38
288
hg19
Lab
257
AMP-T2D consortium
75
Katalin Susztak, Upenn
1
Bing Ren, UCSD
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
Audit category:
2
inconsistent ontology term
assay_slims!
3D chromatin structure
BIOSAMPLE
ASSAY
335 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ATAC-seq
tissue
kidney
13
75
coronary artery
2
36
islet of Langerhans
1
22
heart
18
muscle of arm
17
+ See 52 more…
See all biosamples
Download