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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
snATAC-seq
60
ATAC-seq
Assay category
244
Transcription
136
DNA accessibility
47
DNA methylation
4
3D chromatin structure
Date released
60
May, 2022
27
February, 2021
16
January, 2021
13
February, 2023
10
April, 2020
7
August, 2020
3
September, 2020
Available data
60
zippedFastqFolder
37
fastq
10
bigWig
Organism
135
Homo sapiens
Biosample type
105
primary cell
31
tissue
Organ
70
pancreas
49
epithelium
10
lung
8
blood
8
bodily fluid
Project
AMP
97
HPAP
29
T1D
10
LungMap
Genome assembly (visualization)
10
GRCh38
Lab
97
Klaus Kaestner, Upenn
29
Kyle Gaulton, UCSD
10
Xin Sun, UCSD
Audit category:
27
audit script error
files.file_type!
bam
bed narrowPeak
award.project!
AMP
BIOSAMPLE
ASSAY
136 results
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snATAC-seq
ATAC-seq
primary cell
Langerhans cell
48
pancreatic alpha cell
29
pancreatic beta cell
16
peripheral blood mononuclear cell
8
pancreatic acinar cell
4
tissue
islet of Langerhans
6
11
lung
10
pancreas
4
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