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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ATAC-seq
1
DNase-seq
Assay category
198
DNA binding
138
Transcription
36
DNA accessibility
4
3D chromatin structure
Date released
12
August, 2021
9
February, 2023
5
May, 2021
5
November, 2019
4
October, 2019
1
August, 2017
Available data
22
bed narrowPeak
18
bam
13
bigWig
bed bedgraph
5
bed bed3
4
bed bed3+
3
bigBed narrowPeak
3
txt
1
bed broadPeak
1
bigBed broadPeak
1
fastq
Organism
36
Homo sapiens
Biosample type
469
tissue
288
primary cell
36
in vitro differentiated cells
31
cell line
Organ
14
connective tissue
Project
36
AMP
Genome assembly (visualization)
36
hg19
18
GRCh38
Lab
29
AMP-T2D consortium
5
Kyle Gaulton, UCSD
2
Struan F.A. Grant, CHOP
Audit category:
9
inconsistent ontology term
files.file_type!
bed bedgraph
BIOSAMPLE
ASSAY
36 results
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ATAC-seq
DNase-seq
in vitro differentiated cells
neural progenitor cell
10
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
adipocyte
4
1
chondrocyte
5
embryonic stem cell
5
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