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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
snATAC-seq
5
ATAC-seq
1
FAIRE-seq
Assay category
263
DNA binding
24
Transcription
14
DNA accessibility
3
3D chromatin structure
2
DNA methylation
Date released
8
January, 2021
2
July, 2019
1
February, 2023
1
January, 2018
1
October, 2017
1
October, 2019
Available data
36
bigWig
35
bam
33
bed narrowPeak
33
bigBed narrowPeak
32
bed bed3+
bed broadPeak
32
bigBed broadPeak
3
fastq
1
bed bed3
Organism
14
Homo sapiens
Biosample type
8
primary cell
5
tissue
1
cell line
Organ
164
pancreas
107
epithelium
85
kidney
47
blood vessel
47
heart
47
vasculature
45
artery
28
eye
25
connective tissue
24
liver
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
8
limb
6
adipose tissue
5
brain
2
musculature of body
1
nerve
1
pituitary gland
1
skin of body
1
spleen
1
vein
Project
8
T1D
6
AMP
Genome assembly (visualization)
3
hg19
2
GRCh38
Lab
8
Kyle Gaulton, UCSD
6
AMP-T2D consortium
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
14 results
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snATAC-seq
ATAC-seq
FAIRE-seq
primary cell
peripheral blood mononuclear cell
8
tissue
brain
1
cerebellum (Hemisphere)
1
frontal cortex
1
islet of Langerhans
1
posterior cingulate cortex
1
cell line
GM12878
1
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