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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ATAC-seq
5
FAIRE-seq
3
DNase-seq
Assay category
730
DNA binding
35
DNA accessibility
Date released
14
September, 2018
8
August, 2017
5
October, 2019
5
September, 2017
2
July, 2019
1
November, 2018
Available data
492
bed narrowPeak
389
bam
350
bigWig
241
bigBed narrowPeak
209
bed bed3+
208
bed broadPeak
bigBed broadPeak
102
fastq
64
xls
60
zippedFastqFolder
14
tsv
12
bed bed3
7
bed bedgraph
4
txt
1
tar
Organism
35
Homo sapiens
Biosample type
24
primary cell
8
tissue
2
in vitro differentiated cells
1
cell line
Organ
25
pancreas
24
epithelium
4
connective tissue
2
adipose tissue
2
kidney
1
blood vessel
1
brain
1
liver
1
vasculature
1
vein
Project
35
AMP
Genome assembly (visualization)
35
hg19
26
GRCh38
Lab
35
AMP-T2D consortium
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
35 results
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ATAC-seq
FAIRE-seq
DNase-seq
primary cell
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
endothelial cell of umbilical vein
1
+ See 1 more…
tissue
islet of Langerhans
1
1
adipose tissue
1
frontal cortex
1
kidney
1
pancreas
1
+ See 2 more…
in vitro differentiated cells
adipocyte
2
cell line
glomerular visceral epithelial cell
1
See all biosamples
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