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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ATAC-seq
Assay category
123
Transcription
78
DNA binding
42
DNA accessibility
4
3D chromatin structure
Date released
12
August, 2021
12
February, 2023
5
May, 2021
5
November, 2019
4
February, 2021
4
October, 2019
Available data
22
bed narrowPeak
18
bam
13
bigWig
7
bed bedgraph
5
bed bed3
4
bed bed3+
3
bigBed narrowPeak
3
txt
1
bed broadPeak
1
bigBed broadPeak
fastq
Organism
42
Homo sapiens
Biosample type
429
tissue
228
primary cell
42
in vitro differentiated cells
31
cell line
Organ
17
connective tissue
Project
42
AMP
Genome assembly (visualization)
42
hg19
17
GRCh38
Lab
32
AMP-T2D consortium
5
Kyle Gaulton, UCSD
5
Struan F.A. Grant, CHOP
Audit category:
10
inconsistent ontology term
files.file_type!
fastq
BIOSAMPLE
ASSAY
42 results
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ATAC-seq
in vitro differentiated cells
neural progenitor cell
10
adipocyte
8
embryonic stem cell
6
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
chondrocyte
5
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