Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ATAC-seq
5
FAIRE-seq
2
DNase-seq
Assay category
354
DNA binding
71
DNA accessibility
6
Transcription
1
DNA methylation
Date released
45
May, 2020
18
May, 2022
3
August, 2017
2
July, 2019
1
March, 2019
1
November, 2018
1
October, 2019
Available data
92
bigWig
77
bed narrowPeak
71
bam
60
zippedFastqFolder
49
fastq
14
tsv
10
bed bed3
10
bigBed narrowPeak
7
bed bedgraph
5
bed bed3+
4
txt
2
bed broadPeak
1
bigBed broadPeak
1
tar
Organism
71
Homo sapiens
Biosample type
48
primary cell
23
tissue
Organ
21
pancreas
1
blood vessel
1
brain
1
epithelium
1
kidney
1
vasculature
1
vein
Project
71
AMP
Genome assembly (visualization)
363
hg19
GRCh38
Lab
52
AMP-T2D consortium
18
Kyle Gaulton, UCSD
1
Mark McCarthy, Oxford
Audit category:
4
inconsistent ontology term
assembly!
GRCh38
BIOSAMPLE
ASSAY
71 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
FAIRE-seq
DNase-seq
primary cell
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
+ See 22 more…
tissue
islet of Langerhans
19
1
frontal cortex
1
kidney
1
pancreas
1
See all biosamples
Download