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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
snATAC-seq
9
DNase-seq
5
ATAC-seq
Assay category
710
DNA binding
118
Transcription
41
DNA accessibility
11
DNA methylation
1
3D chromatin structure
Date released
27
February, 2021
7
November, 2018
4
August, 2017
3
October, 2017
Available data
418
bed narrowPeak
314
bam
299
bigWig
209
bigBed narrowPeak
202
bed bed3+
199
bed broadPeak
199
bigBed broadPeak
64
xls
41
fastq
21
zippedFastqFolder
12
bed bed3
12
tsv
7
bed bedgraph
4
txt
1
tar
Organism
41
Homo sapiens
Biosample type
28
primary cell
12
tissue
1
in vitro differentiated cells
Organ
pancreas
32
epithelium
4
connective tissue
4
liver
3
adipose tissue
3
brain
2
spleen
Project
27
HPAP
14
AMP
Genome assembly (visualization)
13
GRCh38
13
hg19
Lab
27
Klaus Kaestner, Upenn
14
AMP-T2D consortium
Audit category:
27
audit script error
organ_slims!
pancreas
BIOSAMPLE
ASSAY
41 results
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snATAC-seq
DNase-seq
ATAC-seq
primary cell
Langerhans cell
27
skeletal muscle myoblast
1
tissue
brain
2
liver
2
omental fat pad
1
1
right lobe of liver
1
1
spleen
1
1
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in vitro differentiated cells
adipocyte
1
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