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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ATAC-seq
6
DNase-seq
Assay category
502
DNA binding
50
Transcription
29
DNA accessibility
7
DNA methylation
4
3D chromatin structure
1
DNA sequencing
Date released
20
May, 2022
3
November, 2018
2
August, 2017
2
June, 2019
1
February, 2021
1
October, 2019
Available data
28
bed narrowPeak
26
bigWig
8
bam
6
bigBed narrowPeak
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
4
fastq
1
bed bed3
Organism
29
Homo sapiens
Biosample type
25
tissue
3
primary cell
1
cell line
Organ
173
pancreas
163
kidney
123
epithelium
77
heart
58
vasculature
56
blood vessel
49
artery
44
limb
37
brain
35
musculature of body
34
connective tissue
32
eye
29
liver
18
ureter
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
8
adipose tissue
3
nerve
3
vein
2
spleen
1
pituitary gland
1
skin of body
Project
29
AMP
Genome assembly (visualization)
28
hg19
8
GRCh38
Lab
20
Karen Mohlke, UNC
9
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
1
inconsistent replicate
month_released!
May, 2020
BIOSAMPLE
ASSAY
29 results
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ATAC-seq
DNase-seq
tissue
liver
20
2
right lobe of liver
1
2
primary cell
Liver fetal (hepatocyte)
1
hepatic stellate cell
1
hepatocyte
1
cell line
HepG2
1
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