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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
122
ATAC-seq
10
DNase-seq
1
FAIRE-seq
Assay category
292
DNA binding
220
Transcription
133
DNA accessibility
5
3D chromatin structure
Date released
187
June, 2019
105
February, 2023
100
May, 2020
99
May, 2022
82
August, 2021
49
February, 2021
34
May, 2021
33
October, 2019
26
November, 2019
16
January, 2021
14
September, 2018
11
August, 2017
11
May, 2023
10
April, 2020
10
November, 2018
8
July, 2019
8
October, 2017
7
August, 2020
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
2
November, 2020
1
August, 2022
Available data
60
bam
59
bigWig
15
bed narrowPeak
12
bigBed narrowPeak
7
bed bed3+
7
bed broadPeak
7
bigBed broadPeak
1
tar
Organism
133
Homo sapiens
Biosample type
107
primary cell
20
tissue
4
in vitro differentiated cells
2
cell line
Organ
7
epithelium
6
blood vessel
6
limb
6
vasculature
4
pancreas
3
artery
3
connective tissue
3
kidney
3
nerve
3
vein
1
adipose tissue
1
brain
1
eye
1
liver
1
pituitary gland
1
skin of body
Project
133
AMP
Genome assembly (visualization)
63
hg19
14
GRCh38
Lab
133
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
BIOSAMPLE
ASSAY
133 results
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ATAC-seq
DNase-seq
FAIRE-seq
primary cell
CD4-positive, alpha-beta memory T cell
22
naive thymus-derived CD4-positive, alpha-beta T cell
22
macrophage
11
endothelial cell of umbilical vein
2
1
B cell
2
+ See 28 more…
tissue
islet of Langerhans
13
tibial artery
1
2
tibial nerve
1
2
adipose tissue
1
in vitro differentiated cells
adipocyte
2
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
cell line
Panc1
1
glomerular visceral epithelial cell
1
See all biosamples
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