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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
88
ATAC-seq
22
snATAC-seq
Assay category
110
DNA accessibility
64
Transcription
41
DNA methylation
Date released
187
June, 2019
105
February, 2023
100
May, 2020
99
May, 2022
82
August, 2021
49
February, 2021
34
May, 2021
33
October, 2019
26
November, 2019
16
January, 2021
14
September, 2018
11
August, 2017
11
May, 2023
10
April, 2020
10
November, 2018
8
July, 2019
8
October, 2017
7
August, 2020
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
2
November, 2020
1
August, 2022
Available data
60
zippedFastqFolder
38
bed narrowPeak
20
bigWig
18
bam
18
fastq
1
bed bed3+
1
txt
Organism
110
Homo sapiens
Biosample type
60
primary cell
50
tissue
Organ
57
pancreas
39
epithelium
20
liver
11
kidney
1
musculature of body
Project
60
HPAP
50
AMP
Genome assembly (visualization)
39
hg19
11
GRCh38
Lab
60
Klaus Kaestner, Upenn
20
Karen Mohlke, UNC
18
Kyle Gaulton, UCSD
11
Katalin Susztak, Upenn
1
AMP-T2D consortium
Audit category:
1
audit script error
BIOSAMPLE
ASSAY
110 results
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ATAC-seq
snATAC-seq
primary cell
pancreatic alpha cell
22
Langerhans cell
21
pancreatic beta cell
13
pancreatic acinar cell
4
tissue
liver
20
islet of Langerhans
18
kidney
11
skeletal muscle tissue
1
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